Keep common genes of two SingleCellExperiment objects.
KeepCommonGenes(reference, query, dots2hyphen = FALSE)
Arguments
- reference
SingleCellExperiment object.
- query
SingleCellExperiment object.
- dots2hyphen
Logic.
Value
A list containing updated SingleCellExperiment obejcts with matching features.
Examples
ref <- scuttle::mockSCE(ncells = 20, ngenes = 10)
query <- scuttle::mockSCE(ncells = 20, ngenes = 10)
query <- query[3:10, ]
res <- KeepCommonGenes(ref, query)
nrow(res$reference)
nrow(res$query)